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Mechanisms of  mRNA localisation

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In Xenopus, mRNAs with proven or probable determinant function become localised to the vegetal cortex in two phases of oogenesis. Early on, while the oocyte is small and transparent, a set of RNAs including those coding for proteins required for germ line development (Xcat2, X-dazl, Xpat) localises to a specialised macroscopic structure called the Mitochondrial Cloud (MC). 

As part of a collaboration with Mary-Lou King (University of Miami) we have been studying the mechanism of RNA localisation to the mitochondrial cloud, by following the behaviour of fluorescently-tagged Xcat2 and Xdazl mRNA constructs injected into pre-vitellogenic Xenopus oocytes (Chang et al, 2004).


24 hours after injection into Stage I or II oocytes, fluorescent  Xcat2 RNA becomes localised in the Mitochondrial Cloud  (MC)

Tlime lapse movies of the localisation process acquired overnight suggest that directed transport is not responable, rather the MC acts as a "sponge" which traps freely diffusing RNA particles
(see Movie : 5.8 MB: 1 image every 10 minutes).

The idea that localisation takes place by a "diffusion-entrapment " mechanism is supported by the results of FRAP  (Fluorescence Recovery After Photobleaching) experiments.
Xcat2 localised in the MC is immobile following photobleaching (top row of images ), whereas in the cytoplasm it recovers with typical diffusion kinetics (bottom)

FRAP

Movie (2.1MB) of a FRAP experiment  showing recovery in the cytoplasm but not in the MC

graph

Vital labeling with the Lipophillic dye DiIC16(3) reveals a dense ER network in the MC

Xcat2 RNA  localises progressively within this zone of concentrated ER  (Movie: 5.3 MB)

In peripheral regions, the Xcat2 particles 'dance' with the ER (512 MB).

DiI Stage I
MC labeled with DiI



At the onset of vitellogenesis (Stage II) the MC  detaches from the nucleus and merges with the cortex, thus bringing germ plasm with associated RNAs to the newly-defined vegetal pole. A second group of RNAs including those encoding Veg-T (which specifies the endoderm terriory) and Vg1 (a TGFß family mesoderm inducer) then starts to localise to the vegetal cortex by the microtubule-dependent "late pathway".


 


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